Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX4O95219 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX4O95219 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX4O95219 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNX4O95219 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SNX4O95219 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 SRD5A1P1-201ENST00000442297 786 ntBASIC20.72■□□□□ 0.91
SNX4O95219 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.72■□□□□ 0.91
SNX4O95219 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX4O95219 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX4O95219 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX4O95219 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.71■□□□□ 0.91
SNX4O95219 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX4O95219 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SNX4O95219 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX4O95219 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX4O95219 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX4O95219 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX4O95219 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
SNX4O95219 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX4O95219 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 AC004812.2-201ENST00000611079 2094 ntBASIC20.7■□□□□ 0.9
SNX4O95219 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX4O95219 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX4O95219 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX4O95219 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX4O95219 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX4O95219 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX4O95219 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNX4O95219 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SNX4O95219 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SNX4O95219 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.69■□□□□ 0.9
SNX4O95219 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX4O95219 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX4O95219 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.68■□□□□ 0.9
SNX4O95219 AC009102.2-201ENST00000606772 1639 ntBASIC20.68■□□□□ 0.9
SNX4O95219 ABCB10P4-201ENST00000566803 2184 ntBASIC20.68■□□□□ 0.9
SNX4O95219 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX4O95219 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX4O95219 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX4O95219 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX4O95219 AC137767.1-201ENST00000602918 1920 ntBASIC20.68■□□□□ 0.9
SNX4O95219 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX4O95219 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SNX4O95219 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX4O95219 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SNX4O95219 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SNX4O95219 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNX4O95219 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX4O95219 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNX4O95219 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.67■□□□□ 0.9
SNX4O95219 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.67■□□□□ 0.9
SNX4O95219 AC233723.2-201ENST00000623798 2106 ntBASIC20.67■□□□□ 0.9
SNX4O95219 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNX4O95219 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX4O95219 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.67■□□□□ 0.9
SNX4O95219 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.67■□□□□ 0.9
SNX4O95219 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX4O95219 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNX4O95219 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX4O95219 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
SNX4O95219 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.66■□□□□ 0.9
SNX4O95219 AC092171.4-201ENST00000609130 632 ntBASIC20.66■□□□□ 0.9
SNX4O95219 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms