Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.31■■□□□ 1.8
PRDM1O75626 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRDM1O75626 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRDM1O75626 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.31■■□□□ 1.8
PRDM1O75626 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRDM1O75626 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRDM1O75626 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRDM1O75626 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.31■■□□□ 1.8
PRDM1O75626 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PRDM1O75626 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PRDM1O75626 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.3■■□□□ 1.8
PRDM1O75626 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
PRDM1O75626 SLC47A1P1-202ENST00000449666 945 ntBASIC26.3■■□□□ 1.8
PRDM1O75626 AC105265.2-201ENST00000467189 838 ntBASIC26.3■■□□□ 1.8
PRDM1O75626 CA15P2-201ENST00000611168 834 ntBASIC26.3■■□□□ 1.8
PRDM1O75626 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRDM1O75626 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PRDM1O75626 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
PRDM1O75626 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.29■■□□□ 1.8
PRDM1O75626 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.29■■□□□ 1.8
PRDM1O75626 AC091305.1-201ENST00000479476 895 ntBASIC26.29■■□□□ 1.8
PRDM1O75626 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRDM1O75626 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRDM1O75626 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
PRDM1O75626 MIR935-201ENST00000401179 91 ntBASIC26.28■■□□□ 1.8
PRDM1O75626 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRDM1O75626 AC027682.1-201ENST00000562846 899 ntBASIC26.28■■□□□ 1.8
PRDM1O75626 AC010525.1-201ENST00000585559 441 ntBASIC26.28■■□□□ 1.8
PRDM1O75626 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PRDM1O75626 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PRDM1O75626 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRDM1O75626 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.28■■□□□ 1.8
PRDM1O75626 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.28■■□□□ 1.8
PRDM1O75626 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.27■■□□□ 1.8
PRDM1O75626 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.27■■□□□ 1.8
PRDM1O75626 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PRDM1O75626 AC233992.3-201ENST00000607491 485 ntBASIC26.27■■□□□ 1.8
PRDM1O75626 RASA4CP-201ENST00000424092 1398 ntBASIC26.27■■□□□ 1.8
PRDM1O75626 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
PRDM1O75626 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRDM1O75626 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PRDM1O75626 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.26■■□□□ 1.79
PRDM1O75626 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PRDM1O75626 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PRDM1O75626 BX842568.3-201ENST00000418104 571 ntBASIC26.26■■□□□ 1.79
PRDM1O75626 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PRDM1O75626 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PRDM1O75626 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRDM1O75626 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PRDM1O75626 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PRDM1O75626 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PRDM1O75626 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PRDM1O75626 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.25■■□□□ 1.79
PRDM1O75626 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRDM1O75626 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PRDM1O75626 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.24■■□□□ 1.79
PRDM1O75626 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRDM1O75626 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PRDM1O75626 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.24■■□□□ 1.79
PRDM1O75626 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.24■■□□□ 1.79
PRDM1O75626 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.24■■□□□ 1.79
PRDM1O75626 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRDM1O75626 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRDM1O75626 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PRDM1O75626 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PRDM1O75626 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.24■■□□□ 1.79
PRDM1O75626 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.23■■□□□ 1.79
PRDM1O75626 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PRDM1O75626 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PRDM1O75626 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PRDM1O75626 AC004687.1-201ENST00000579003 1625 ntBASIC26.23■■□□□ 1.79
PRDM1O75626 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRDM1O75626 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.22■■□□□ 1.79
PRDM1O75626 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PRDM1O75626 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
PRDM1O75626 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRDM1O75626 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRDM1O75626 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.22■■□□□ 1.79
PRDM1O75626 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.22■■□□□ 1.79
PRDM1O75626 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PRDM1O75626 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.22■■□□□ 1.79
PRDM1O75626 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRDM1O75626 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PRDM1O75626 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms