Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NDUFS3O75489 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.12■■□□□ 1.13
NDUFS3O75489 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 AL117332.1-201ENST00000622628 974 ntBASIC22.12■■□□□ 1.13
NDUFS3O75489 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
NDUFS3O75489 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NDUFS3O75489 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.12■■□□□ 1.13
NDUFS3O75489 C1orf229-201ENST00000623686 2258 ntBASIC22.11■■□□□ 1.13
NDUFS3O75489 C17orf82-201ENST00000623772 1530 ntBASIC22.11■■□□□ 1.13
NDUFS3O75489 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.11■■□□□ 1.13
NDUFS3O75489 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NDUFS3O75489 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
NDUFS3O75489 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.11■■□□□ 1.13
NDUFS3O75489 DUX4L4-201ENST00000566884 1269 ntBASIC22.11■■□□□ 1.13
NDUFS3O75489 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NDUFS3O75489 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.1■■□□□ 1.13
NDUFS3O75489 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.1■■□□□ 1.13
NDUFS3O75489 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.1■■□□□ 1.13
NDUFS3O75489 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NDUFS3O75489 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.09■■□□□ 1.13
NDUFS3O75489 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NDUFS3O75489 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NDUFS3O75489 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
NDUFS3O75489 AL356441.2-201ENST00000443009 864 ntBASIC22.09■■□□□ 1.13
NDUFS3O75489 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NDUFS3O75489 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.09■■□□□ 1.13
NDUFS3O75489 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.09■■□□□ 1.13
NDUFS3O75489 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
NDUFS3O75489 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NDUFS3O75489 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NDUFS3O75489 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.08■■□□□ 1.13
NDUFS3O75489 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NDUFS3O75489 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.08■■□□□ 1.13
NDUFS3O75489 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
NDUFS3O75489 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.07■■□□□ 1.12
NDUFS3O75489 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.07■■□□□ 1.12
NDUFS3O75489 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.07■■□□□ 1.12
NDUFS3O75489 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.07■■□□□ 1.12
NDUFS3O75489 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.07■■□□□ 1.12
NDUFS3O75489 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
NDUFS3O75489 MIR3621-201ENST00000580529 85 ntBASIC22.07■■□□□ 1.12
NDUFS3O75489 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
NDUFS3O75489 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.07■■□□□ 1.12
NDUFS3O75489 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDUFS3O75489 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.07■■□□□ 1.12
NDUFS3O75489 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NDUFS3O75489 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NDUFS3O75489 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
NDUFS3O75489 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDUFS3O75489 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NDUFS3O75489 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NDUFS3O75489 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
NDUFS3O75489 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.06■■□□□ 1.12
NDUFS3O75489 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.05■■□□□ 1.12
NDUFS3O75489 AC009086.3-201ENST00000623486 1008 ntBASIC22.05■■□□□ 1.12
NDUFS3O75489 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
NDUFS3O75489 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
NDUFS3O75489 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.05■■□□□ 1.12
NDUFS3O75489 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDUFS3O75489 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.05■■□□□ 1.12
NDUFS3O75489 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
NDUFS3O75489 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
NDUFS3O75489 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
NDUFS3O75489 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.04■■□□□ 1.12
NDUFS3O75489 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.04■■□□□ 1.12
NDUFS3O75489 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.04■■□□□ 1.12
NDUFS3O75489 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.04■■□□□ 1.12
NDUFS3O75489 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDUFS3O75489 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
NDUFS3O75489 AC233723.2-201ENST00000623798 2106 ntBASIC22.03■■□□□ 1.12
NDUFS3O75489 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.03■■□□□ 1.12
NDUFS3O75489 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms