Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.72■■□□□ 1.07
NPHS1O60500 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.72■■□□□ 1.07
NPHS1O60500 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NPHS1O60500 MIR4508-201ENST00000584178 70 ntBASIC21.72■■□□□ 1.07
NPHS1O60500 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
NPHS1O60500 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.72■■□□□ 1.07
NPHS1O60500 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NPHS1O60500 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 AC087742.1-201ENST00000575880 1738 ntBASIC21.72■■□□□ 1.07
NPHS1O60500 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPHS1O60500 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 C11orf96-202ENST00000528572 1834 ntBASIC21.71■■□□□ 1.07
NPHS1O60500 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.71■■□□□ 1.07
NPHS1O60500 TSPY13P-201ENST00000338964 914 ntBASIC21.71■■□□□ 1.07
NPHS1O60500 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NPHS1O60500 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NPHS1O60500 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
NPHS1O60500 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPHS1O60500 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NPHS1O60500 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NPHS1O60500 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.7■■□□□ 1.07
NPHS1O60500 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
NPHS1O60500 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.7■■□□□ 1.06
NPHS1O60500 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.7■■□□□ 1.06
NPHS1O60500 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NPHS1O60500 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 AC080038.3-201ENST00000623346 1952 ntBASIC21.7■■□□□ 1.06
NPHS1O60500 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
NPHS1O60500 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPHS1O60500 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NPHS1O60500 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPHS1O60500 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NPHS1O60500 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
NPHS1O60500 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPHS1O60500 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NPHS1O60500 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPHS1O60500 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPHS1O60500 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.68■■□□□ 1.06
NPHS1O60500 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPHS1O60500 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPHS1O60500 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
NPHS1O60500 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.67■■□□□ 1.06
NPHS1O60500 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NPHS1O60500 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.67■■□□□ 1.06
NPHS1O60500 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.67■■□□□ 1.06
NPHS1O60500 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.67■■□□□ 1.06
NPHS1O60500 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.67■■□□□ 1.06
NPHS1O60500 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPHS1O60500 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPHS1O60500 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.66■■□□□ 1.06
NPHS1O60500 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.66■■□□□ 1.06
NPHS1O60500 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.66■■□□□ 1.06
NPHS1O60500 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NPHS1O60500 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPHS1O60500 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPHS1O60500 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPHS1O60500 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPHS1O60500 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.65■■□□□ 1.06
NPHS1O60500 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPHS1O60500 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPHS1O60500 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.64■■□□□ 1.05
NPHS1O60500 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPHS1O60500 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.64■■□□□ 1.05
NPHS1O60500 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.64■■□□□ 1.05
NPHS1O60500 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPHS1O60500 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms