Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.53■■□□□ 1.04
PEX1O43933 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX1O43933 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PEX1O43933 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX1O43933 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PEX1O43933 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX1O43933 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.52■■□□□ 1.04
PEX1O43933 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.52■■□□□ 1.04
PEX1O43933 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.52■■□□□ 1.04
PEX1O43933 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.52■■□□□ 1.04
PEX1O43933 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PEX1O43933 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PEX1O43933 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PEX1O43933 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PEX1O43933 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PEX1O43933 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PEX1O43933 AC021242.3-201ENST00000607598 1377 ntBASIC21.51■■□□□ 1.03
PEX1O43933 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.51■■□□□ 1.03
PEX1O43933 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PEX1O43933 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PEX1O43933 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.5■■□□□ 1.03
PEX1O43933 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.5■■□□□ 1.03
PEX1O43933 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.5■■□□□ 1.03
PEX1O43933 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PEX1O43933 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PEX1O43933 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.49■■□□□ 1.03
PEX1O43933 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.49■■□□□ 1.03
PEX1O43933 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.49■■□□□ 1.03
PEX1O43933 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.49■■□□□ 1.03
PEX1O43933 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PEX1O43933 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PEX1O43933 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.49■■□□□ 1.03
PEX1O43933 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.49■■□□□ 1.03
PEX1O43933 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PEX1O43933 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PEX1O43933 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.49■■□□□ 1.03
PEX1O43933 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PEX1O43933 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.48■■□□□ 1.03
PEX1O43933 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.48■■□□□ 1.03
PEX1O43933 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.48■■□□□ 1.03
PEX1O43933 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PEX1O43933 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.48■■□□□ 1.03
PEX1O43933 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PEX1O43933 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX1O43933 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX1O43933 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX1O43933 UNC93B8-201ENST00000511903 705 ntBASIC21.47■■□□□ 1.03
PEX1O43933 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.47■■□□□ 1.03
PEX1O43933 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX1O43933 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.47■■□□□ 1.03
PEX1O43933 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PEX1O43933 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.47■■□□□ 1.03
PEX1O43933 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX1O43933 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX1O43933 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
PEX1O43933 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX1O43933 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX1O43933 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PEX1O43933 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX1O43933 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX1O43933 TSPY9P-201ENST00000440215 945 ntBASIC21.46■■□□□ 1.03
PEX1O43933 TSPY11P-201ENST00000442607 1045 ntBASIC21.46■■□□□ 1.03
PEX1O43933 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX1O43933 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX1O43933 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX1O43933 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
PEX1O43933 ESRRAP2-201ENST00000418437 1549 ntBASIC21.45■■□□□ 1.02
PEX1O43933 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms