Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC133637.1-201ENST00000624115 1537 ntBASIC19.92■□□□□ 0.78
CXCL13O43927 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CXCL13O43927 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.92■□□□□ 0.78
CXCL13O43927 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CXCL13O43927 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.92■□□□□ 0.78
CXCL13O43927 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CXCL13O43927 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 EDA-201ENST00000338901 1233 ntBASIC19.91■□□□□ 0.78
CXCL13O43927 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
CXCL13O43927 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.91■□□□□ 0.78
CXCL13O43927 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.91■□□□□ 0.78
CXCL13O43927 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.91■□□□□ 0.78
CXCL13O43927 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL13O43927 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCL13O43927 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCL13O43927 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCL13O43927 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.9■□□□□ 0.78
CXCL13O43927 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
CXCL13O43927 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL13O43927 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL13O43927 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL13O43927 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CXCL13O43927 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL13O43927 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.89■□□□□ 0.77
CXCL13O43927 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.89■□□□□ 0.77
CXCL13O43927 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.89■□□□□ 0.77
CXCL13O43927 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.89■□□□□ 0.77
CXCL13O43927 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.89■□□□□ 0.77
CXCL13O43927 AL031432.3-201ENST00000607698 485 ntBASIC19.89■□□□□ 0.77
CXCL13O43927 AL355001.2-201ENST00000620617 1191 ntBASIC19.89■□□□□ 0.77
CXCL13O43927 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL13O43927 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CXCL13O43927 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL13O43927 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.88■□□□□ 0.77
CXCL13O43927 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL13O43927 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CXCL13O43927 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.88■□□□□ 0.77
CXCL13O43927 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CXCL13O43927 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL13O43927 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL13O43927 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CXCL13O43927 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL13O43927 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.87■□□□□ 0.77
CXCL13O43927 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.87■□□□□ 0.77
CXCL13O43927 AC142381.2-201ENST00000566120 298 ntBASIC19.87■□□□□ 0.77
CXCL13O43927 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL13O43927 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.86■□□□□ 0.77
CXCL13O43927 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL13O43927 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CXCL13O43927 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL13O43927 AF213884.3-201ENST00000563833 479 ntBASIC19.86■□□□□ 0.77
CXCL13O43927 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL13O43927 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL13O43927 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CXCL13O43927 AC004687.1-201ENST00000579003 1625 ntBASIC19.86■□□□□ 0.77
CXCL13O43927 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CXCL13O43927 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL13O43927 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CXCL13O43927 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms