Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IDH3BO43837 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IDH3BO43837 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IDH3BO43837 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IDH3BO43837 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
IDH3BO43837 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
IDH3BO43837 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.27■□□□□ 0.84
IDH3BO43837 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IDH3BO43837 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
IDH3BO43837 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.27■□□□□ 0.84
IDH3BO43837 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IDH3BO43837 PVT1_1.1-201ENST00000615125 194 ntBASIC20.27■□□□□ 0.84
IDH3BO43837 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.27■□□□□ 0.84
IDH3BO43837 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IDH3BO43837 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.27■□□□□ 0.83
IDH3BO43837 RNF165-205ENST00000588679 2904 ntBASIC20.26■□□□□ 0.83
IDH3BO43837 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IDH3BO43837 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
IDH3BO43837 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IDH3BO43837 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.26■□□□□ 0.83
IDH3BO43837 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IDH3BO43837 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IDH3BO43837 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.25■□□□□ 0.83
IDH3BO43837 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.25■□□□□ 0.83
IDH3BO43837 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
IDH3BO43837 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IDH3BO43837 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
IDH3BO43837 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IDH3BO43837 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
IDH3BO43837 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
IDH3BO43837 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.24■□□□□ 0.83
IDH3BO43837 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.24■□□□□ 0.83
IDH3BO43837 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IDH3BO43837 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
IDH3BO43837 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IDH3BO43837 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IDH3BO43837 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IDH3BO43837 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IDH3BO43837 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IDH3BO43837 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.23■□□□□ 0.83
IDH3BO43837 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.23■□□□□ 0.83
IDH3BO43837 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IDH3BO43837 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
IDH3BO43837 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.22■□□□□ 0.83
IDH3BO43837 MIR4508-201ENST00000584178 70 ntBASIC20.22■□□□□ 0.83
IDH3BO43837 AC010980.1-201ENST00000587192 1142 ntBASIC20.22■□□□□ 0.83
IDH3BO43837 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IDH3BO43837 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.21■□□□□ 0.83
IDH3BO43837 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.21■□□□□ 0.83
IDH3BO43837 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.21■□□□□ 0.83
IDH3BO43837 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IDH3BO43837 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3BO43837 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.21■□□□□ 0.83
IDH3BO43837 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.21■□□□□ 0.83
IDH3BO43837 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3BO43837 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.2■□□□□ 0.82
IDH3BO43837 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3BO43837 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3BO43837 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3BO43837 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IDH3BO43837 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3BO43837 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.19■□□□□ 0.82
IDH3BO43837 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IDH3BO43837 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.19■□□□□ 0.82
IDH3BO43837 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms