Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.62■■□□□ 1.05
TAF4O00268 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.62■■□□□ 1.05
TAF4O00268 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.62■■□□□ 1.05
TAF4O00268 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TAF4O00268 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TAF4O00268 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 AC138932.3-201ENST00000567634 1902 ntBASIC21.61■■□□□ 1.05
TAF4O00268 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 CDCA4P2-201ENST00000441182 718 ntBASIC21.61■■□□□ 1.05
TAF4O00268 KRT18P14-201ENST00000534205 1250 ntBASIC21.61■■□□□ 1.05
TAF4O00268 MIR3181-201ENST00000578512 73 ntBASIC21.61■■□□□ 1.05
TAF4O00268 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TAF4O00268 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
TAF4O00268 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TAF4O00268 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
TAF4O00268 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
TAF4O00268 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.61■■□□□ 1.05
TAF4O00268 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TAF4O00268 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.6■■□□□ 1.05
TAF4O00268 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.6■■□□□ 1.05
TAF4O00268 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.6■■□□□ 1.05
TAF4O00268 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.6■■□□□ 1.05
TAF4O00268 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TAF4O00268 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TAF4O00268 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TAF4O00268 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TAF4O00268 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.59■■□□□ 1.05
TAF4O00268 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.59■■□□□ 1.05
TAF4O00268 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TAF4O00268 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
TAF4O00268 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TAF4O00268 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TAF4O00268 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.59■■□□□ 1.05
TAF4O00268 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TAF4O00268 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TAF4O00268 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
TAF4O00268 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.58■■□□□ 1.05
TAF4O00268 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.58■■□□□ 1.05
TAF4O00268 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.58■■□□□ 1.05
TAF4O00268 AC241377.3-202ENST00000626088 1088 ntBASIC21.58■■□□□ 1.05
TAF4O00268 AC241585.3-202ENST00000628937 1088 ntBASIC21.58■■□□□ 1.05
TAF4O00268 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TAF4O00268 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TAF4O00268 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TAF4O00268 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
TAF4O00268 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TAF4O00268 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 C17orf82-201ENST00000623772 1530 ntBASIC21.57■■□□□ 1.04
TAF4O00268 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.57■■□□□ 1.04
TAF4O00268 TERF1P2-201ENST00000583350 1212 ntBASIC21.57■■□□□ 1.04
TAF4O00268 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.57■■□□□ 1.04
TAF4O00268 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TAF4O00268 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TAF4O00268 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
TAF4O00268 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TAF4O00268 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TAF4O00268 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TAF4O00268 AC022211.4-201ENST00000625094 2161 ntBASIC21.56■■□□□ 1.04
TAF4O00268 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.56■■□□□ 1.04
TAF4O00268 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.56■■□□□ 1.04
TAF4O00268 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.56■■□□□ 1.04
TAF4O00268 AC073111.5-205ENST00000641717 521 ntBASIC21.56■■□□□ 1.04
TAF4O00268 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TAF4O00268 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TAF4O00268 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TAF4O00268 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TAF4O00268 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.55■■□□□ 1.04
TAF4O00268 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.55■■□□□ 1.04
TAF4O00268 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.55■■□□□ 1.04
TAF4O00268 AC012414.1-201ENST00000556676 535 ntBASIC21.55■■□□□ 1.04
TAF4O00268 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TAF4O00268 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TAF4O00268 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms