Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF223E7ERA6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF223E7ERA6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF223E7ERA6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF223E7ERA6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF223E7ERA6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF223E7ERA6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF223E7ERA6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF223E7ERA6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF223E7ERA6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF223E7ERA6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF223E7ERA6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF223E7ERA6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF223E7ERA6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF223E7ERA6 AC135731.1-201ENST00000569415 2548 ntBASIC18.53■□□□□ 0.56
RNF223E7ERA6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.52■□□□□ 0.56
RNF223E7ERA6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 DUX4L4-201ENST00000566884 1269 ntBASIC18.52■□□□□ 0.56
RNF223E7ERA6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF223E7ERA6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF223E7ERA6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF223E7ERA6 FP325331.1-202ENST00000623531 1380 ntBASIC18.52■□□□□ 0.55
RNF223E7ERA6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RNF223E7ERA6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF223E7ERA6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF223E7ERA6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF223E7ERA6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF223E7ERA6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF223E7ERA6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF223E7ERA6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF223E7ERA6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF223E7ERA6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF223E7ERA6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF223E7ERA6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF223E7ERA6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF223E7ERA6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF223E7ERA6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 AC006015.1-201ENST00000429970 570 ntBASIC18.49■□□□□ 0.55
RNF223E7ERA6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF223E7ERA6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF223E7ERA6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF223E7ERA6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF223E7ERA6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF223E7ERA6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF223E7ERA6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF223E7ERA6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF223E7ERA6 KRT18P61-201ENST00000585825 1298 ntBASIC18.48■□□□□ 0.55
RNF223E7ERA6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF223E7ERA6 AC073111.5-205ENST00000641717 521 ntBASIC18.48■□□□□ 0.55
RNF223E7ERA6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF223E7ERA6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF223E7ERA6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF223E7ERA6 CDCA4P2-201ENST00000441182 718 ntBASIC18.47■□□□□ 0.55
RNF223E7ERA6 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF223E7ERA6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF223E7ERA6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF223E7ERA6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms