Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM200CA6NKL6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 AF213884.3-201ENST00000563833 479 ntBASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 AC142381.2-201ENST00000566120 298 ntBASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 AL353803.4-201ENST00000565882 1934 ntBASIC20.59■□□□□ 0.89
TMEM200CA6NKL6 AC133637.1-201ENST00000624115 1537 ntBASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 ANOS2P-203ENST00000472227 1816 ntBASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TMEM200CA6NKL6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM200CA6NKL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.88
TMEM200CA6NKL6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM200CA6NKL6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM200CA6NKL6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TMEM200CA6NKL6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 AC092068.2-201ENST00000590491 1708 ntBASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM200CA6NKL6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TMEM200CA6NKL6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 BX842568.3-201ENST00000418104 571 ntBASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 AC091305.1-201ENST00000479476 895 ntBASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 AC008764.7-201ENST00000593779 1081 ntBASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM200CA6NKL6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms