Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV3S1A0A5B6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV3S1A0A5B6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV3S1A0A5B6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV3S1A0A5B6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TCRBV3S1A0A5B6 AC133552.2-201ENST00000619106 1032 ntBASIC20.85■□□□□ 0.93
TCRBV3S1A0A5B6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBV3S1A0A5B6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 AC011551.1-201ENST00000614101 683 ntBASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV3S1A0A5B6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 AC073130.3-201ENST00000624389 2278 ntBASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV3S1A0A5B6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV3S1A0A5B6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TCRBV3S1A0A5B6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 AC018755.3-202ENST00000596210 929 ntBASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TCRBV3S1A0A5B6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 SPCS2P3-201ENST00000500401 656 ntBASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV3S1A0A5B6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV3S1A0A5B6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV3S1A0A5B6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV3S1A0A5B6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV3S1A0A5B6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms