Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 ATP5G2P3-201ENST00000429083 425 ntBASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 AL353803.4-201ENST00000565882 1934 ntBASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 AC004987.1-201ENST00000428627 508 ntBASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV21A0A0B4J279 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV21A0A0B4J279 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV21A0A0B4J279 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 TSPY13P-201ENST00000338964 914 ntBASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 AC010980.1-201ENST00000587192 1142 ntBASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 PVT1_1.1-201ENST00000615125 194 ntBASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV21A0A0B4J279 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRAV21A0A0B4J279 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
TRAV21A0A0B4J279 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV21A0A0B4J279 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV21A0A0B4J279 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms