Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV3A0A0B4J244 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV3A0A0B4J244 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV3A0A0B4J244 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV3A0A0B4J244 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV3A0A0B4J244 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 AC242852.2-201ENST00000615738 1807 ntBASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV3A0A0B4J244 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV3A0A0B4J244 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 AC127496.7-201ENST00000625110 1798 ntBASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV3A0A0B4J244 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 AC021242.3-201ENST00000607598 1377 ntBASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV3A0A0B4J244 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV3A0A0B4J244 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms