Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 IGHV3-19-201ENST00000521488 291 ntBASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 LINC01124-201ENST00000409786 2117 ntBASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 AC104564.3-201ENST00000582367 638 ntBASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV10A0A0B4J240 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV10A0A0B4J240 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 AL358852.1-201ENST00000623174 1268 ntBASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV10A0A0B4J240 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.64■□□□□ 0.1
TRAV10A0A0B4J240 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 AC092666.2-201ENST00000613287 246 ntBASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV10A0A0B4J240 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 MIR572-201ENST00000384983 95 ntBASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 AC087623.3-201ENST00000607047 1098 ntBASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV10A0A0B4J240 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV10A0A0B4J240 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms