Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 DUX4L4-201ENST00000566884 1269 ntBASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AL117332.1-201ENST00000622628 974 ntBASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AL117328.2-201ENST00000624617 1940 ntBASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 AL356441.2-201ENST00000443009 864 ntBASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 MIR3621-201ENST00000580529 85 ntBASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 EP400NL-214ENST00000641289 2402 ntBASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.63■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 GUSBP5-202ENST00000510805 1989 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms