Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV16A0A0A6YYK6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 AC022616.5-201ENST00000518796 181 ntBASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 MIR6089-201ENST00000616698 64 ntBASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV16A0A0A6YYK6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
TRAV16A0A0A6YYK6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 AL592295.1-201ENST00000400984 884 ntBASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 AL033527.3-201ENST00000566366 1196 ntBASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV16A0A0A6YYK6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 AC019171.1-201ENST00000601251 1056 ntBASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 AC242852.2-201ENST00000615738 1807 ntBASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV16A0A0A6YYK6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV16A0A0A6YYK6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV16A0A0A6YYK6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV16A0A0A6YYK6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV16A0A0A6YYK6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms