Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV25-1A0A075B6N4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRBV25-1A0A075B6N4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV25-1A0A075B6N4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 AC139795.1-202ENST00000500444 432 ntBASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 U85056.1-201ENST00000616429 682 ntBASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV25-1A0A075B6N4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 AC022616.5-201ENST00000518796 181 ntBASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV25-1A0A075B6N4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV25-1A0A075B6N4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRBV25-1A0A075B6N4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 KRT18P60-201ENST00000312876 1297 ntBASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV25-1A0A075B6N4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 ABHD17AP5-201ENST00000580133 923 ntBASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV25-1A0A075B6N4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms