Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC007274.2-201ENST00000421675 662 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AL807761.2-201ENST00000422849 729 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC005722.1-201ENST00000431878 964 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 RN7SL67P-201ENST00000492147 296 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TRIM80P-201ENST00000455685 2848 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 AC108024.1-201ENST00000626286 1721 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TBC1D3J-201ENST00000620719 1426 ntBASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
HLA-DRB4X5D2U9 TNRC18P1-201ENST00000502875 3650 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 Z98885.3-201ENST00000624882 1757 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC020763.3-201ENST00000625095 2904 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 NRADDP-202ENST00000641269 1585 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 RN7SL788P-201ENST00000460504 316 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 CD81-209ENST00000492627 886 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 MIR3677-201ENST00000578964 60 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 MIR3940-201ENST00000579148 102 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC012044.1-201ENST00000603431 297 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC091812.3-201ENST00000621362 345 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AL139099.5-201ENST00000635274 300 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms