Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AC005722.1-201ENST00000431878 964 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 PTPA-219ENST00000435305 530 ntTSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AC010997.1-201ENST00000447646 350 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 SNORA47-201ENST00000458862 138 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 RN7SL2-201ENST00000490232 300 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 AL139317.2-201ENST00000556998 158 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 MIR4309-201ENST00000582498 83 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 RN7SL4P-201ENST00000584058 295 ntBASIC13.46□□□□□ -0.25
NCDNQ9UBB6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.46□□□□□ -0.25
NCDNQ9UBB6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
NCDNQ9UBB6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 DLX4-206ENST00000611342 1662 ntBASIC13.45□□□□□ -0.26
NCDNQ9UBB6 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 KRT18P15-201ENST00000458108 1291 ntBASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 RN7SL638P-201ENST00000494527 290 ntBASIC13.45□□□□□ -0.26
NCDNQ9UBB6 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 MIR4326-201ENST00000582203 59 ntBASIC13.45□□□□□ -0.26
NCDNQ9UBB6 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 AC239600.1-201ENST00000603201 462 ntBASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.45□□□□□ -0.26
NCDNQ9UBB6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NCDNQ9UBB6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms