Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC073862.5-201ENST00000624129 2027 ntBASIC18.29■□□□□ 0.52
CGNL1Q0VF96 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CGNL1Q0VF96 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 AL357373.1-201ENST00000394974 322 ntBASIC18.28■□□□□ 0.52
CGNL1Q0VF96 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.28■□□□□ 0.52
CGNL1Q0VF96 RPL35P1-201ENST00000450819 370 ntBASIC18.28■□□□□ 0.52
CGNL1Q0VF96 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 AC091304.3-201ENST00000566500 716 ntBASIC18.28■□□□□ 0.52
CGNL1Q0VF96 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 FTO-214ENST00000636218 2227 ntTSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 PPT1-213ENST00000641319 2388 ntBASIC18.28■□□□□ 0.52
CGNL1Q0VF96 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 GDA-203ENST00000376986 1771 ntTSL 2 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CGNL1Q0VF96 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 RN7SKP255-201ENST00000363442 313 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 RN7SKP203-201ENST00000363618 332 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 RN7SKP71-201ENST00000364558 318 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 7SK.1-201ENST00000365328 331 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 HIST1H2APS2-201ENST00000454426 370 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 BCL2L12P1-201ENST00000508390 733 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 SLC25A51P3-201ENST00000521814 889 ntBASIC18.27■□□□□ 0.52
CGNL1Q0VF96 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CGNL1Q0VF96 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms