Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.28□□□□□ -0.44
SUMO3P55854 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SUMO3P55854 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SUMO3P55854 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 AL022323.5-201ENST00000624101 2059 ntBASIC12.28□□□□□ -0.44
SUMO3P55854 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.28□□□□□ -0.44
SUMO3P55854 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SUMO3P55854 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SUMO3P55854 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 AC104758.3-203ENST00000562938 2123 ntBASIC12.28□□□□□ -0.44
SUMO3P55854 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SUMO3P55854 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.28□□□□□ -0.44
SUMO3P55854 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.27□□□□□ -0.44
SUMO3P55854 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SUMO3P55854 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.27□□□□□ -0.44
SUMO3P55854 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.27□□□□□ -0.44
SUMO3P55854 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SUMO3P55854 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.27□□□□□ -0.44
SUMO3P55854 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SUMO3P55854 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 RN7SL351P-201ENST00000469306 248 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC12.27□□□□□ -0.45
SUMO3P55854 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.27□□□□□ -0.45
SUMO3P55854 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.27□□□□□ -0.45
SUMO3P55854 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 BAK1P2-201ENST00000532665 631 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC12.27□□□□□ -0.45
SUMO3P55854 RN7SL371P-201ENST00000578099 267 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 AL606495.2-201ENST00000605867 535 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 CTBP2P8-201ENST00000422584 1330 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 AL122018.1-201ENST00000446607 2310 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 EGLN3-205ENST00000547327 2849 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms