Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.89■□□□□ 0.29
COL15A1P39059 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC16.89■□□□□ 0.29
COL15A1P39059 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL15A1P39059 TEDDM2P-201ENST00000414169 786 ntBASIC16.89■□□□□ 0.29
COL15A1P39059 AP000343.1-201ENST00000440602 385 ntBASIC16.89■□□□□ 0.29
COL15A1P39059 AC010997.1-201ENST00000447646 350 ntBASIC16.89■□□□□ 0.29
COL15A1P39059 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC16.89■□□□□ 0.29
COL15A1P39059 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC16.89■□□□□ 0.29
COL15A1P39059 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.89■□□□□ 0.29
COL15A1P39059 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL15A1P39059 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.88■□□□□ 0.29
COL15A1P39059 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.88■□□□□ 0.29
COL15A1P39059 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
COL15A1P39059 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.88■□□□□ 0.29
COL15A1P39059 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 AC091807.1-201ENST00000418838 1544 ntBASIC16.88■□□□□ 0.29
COL15A1P39059 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL15A1P39059 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL15A1P39059 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC16.88■□□□□ 0.29
COL15A1P39059 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL15A1P39059 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC16.88■□□□□ 0.29
COL15A1P39059 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 RPL3P9-201ENST00000463217 1183 ntBASIC16.88■□□□□ 0.29
COL15A1P39059 RN7SL638P-201ENST00000494527 290 ntBASIC16.88■□□□□ 0.29
COL15A1P39059 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC16.88■□□□□ 0.29
COL15A1P39059 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL15A1P39059 MST1L-204ENST00000545160 559 ntTSL 4 BASIC16.88■□□□□ 0.29
COL15A1P39059 AC254633.1-201ENST00000606790 345 ntBASIC16.88■□□□□ 0.29
COL15A1P39059 AC148476.1-201ENST00000622182 705 ntBASIC16.88■□□□□ 0.29
COL15A1P39059 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.88■□□□□ 0.29
COL15A1P39059 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
COL15A1P39059 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
COL15A1P39059 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
COL15A1P39059 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL15A1P39059 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 MIR324-201ENST00000362183 83 ntBASIC16.87■□□□□ 0.29
COL15A1P39059 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL15A1P39059 AC093106.1-201ENST00000437271 352 ntBASIC16.87■□□□□ 0.29
COL15A1P39059 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.87■□□□□ 0.29
COL15A1P39059 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC16.87■□□□□ 0.29
COL15A1P39059 RN7SL47P-201ENST00000488710 299 ntBASIC16.87■□□□□ 0.29
COL15A1P39059 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms