Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.08□□□□□ -0.48
CTLA4P16410 SNORD3B-1-201ENST00000577988 758 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.08□□□□□ -0.48
CTLA4P16410 AL359091.4-201ENST00000610052 409 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 MIR6787-201ENST00000616675 61 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 MIR6799-201ENST00000620297 69 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 CU633904.3-201ENST00000624042 1029 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 AC006453.1-201ENST00000636037 1257 ntBASIC12.08□□□□□ -0.48
CTLA4P16410 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CTLA4P16410 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
CTLA4P16410 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CTLA4P16410 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.08□□□□□ -0.48
CTLA4P16410 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTLA4P16410 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.08□□□□□ -0.48
CTLA4P16410 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 CFL1P6-201ENST00000400899 494 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 AC007274.2-201ENST00000421675 662 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 AL133466.1-201ENST00000447582 150 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
CTLA4P16410 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 OR5BD1P-201ENST00000532527 817 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 DNM1P51-201ENST00000558149 522 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.07□□□□□ -0.48
CTLA4P16410 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 AC011491.1-203ENST00000637688 543 ntBASIC12.07□□□□□ -0.48
CTLA4P16410 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
CTLA4P16410 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CTLA4P16410 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CTLA4P16410 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.07□□□□□ -0.48
CTLA4P16410 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CTLA4P16410 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.06□□□□□ -0.48
CTLA4P16410 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CTLA4P16410 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.06□□□□□ -0.48
CTLA4P16410 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CTLA4P16410 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CTLA4P16410 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CTLA4P16410 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CTLA4P16410 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms