Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 AC107375.1-201ENST00000564464 2231 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 AC003958.1-201ENST00000435883 421 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.92□□□□□ -0.34
SCN2BO60939 BX284668.4-201ENST00000453917 508 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.92□□□□□ -0.34
SCN2BO60939 RPL18AP8-201ENST00000486071 528 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.92□□□□□ -0.34
SCN2BO60939 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 DNM1P51-201ENST00000558149 522 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 AC145285.5-201ENST00000562217 361 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.92□□□□□ -0.34
SCN2BO60939 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 AC009145.4-201ENST00000625119 1294 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
SCN2BO60939 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 AL031587.5-201ENST00000624344 1849 ntBASIC12.92□□□□□ -0.34
SCN2BO60939 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SCN2BO60939 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SCN2BO60939 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 AC092573.1-201ENST00000433054 884 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.91□□□□□ -0.34
SCN2BO60939 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 RN7SL258P-201ENST00000478664 300 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 AC132812.1-201ENST00000583145 892 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.91□□□□□ -0.34
SCN2BO60939 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.91□□□□□ -0.34
SCN2BO60939 AC009560.1-201ENST00000620208 434 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
SCN2BO60939 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SCN2BO60939 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.91□□□□□ -0.34
SCN2BO60939 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SCN2BO60939 AL450468.2-201ENST00000565955 1889 ntBASIC12.91□□□□□ -0.34
SCN2BO60939 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCN2BO60939 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms