Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AL358781.1-202ENST00000321081 1360 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ABCD1P2-201ENST00000429313 1601 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 KRT17P4-201ENST00000429445 819 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ALG1L3P-201ENST00000503331 765 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC010632.2-201ENST00000588369 1224 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC006483.2-201ENST00000609813 515 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 HMGB1P24-201ENST00000611897 328 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 AC020763.3-201ENST00000625095 2904 ntBASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPA3F8WFD2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AF013593.1-201ENST00000458074 1487 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 SNORA50C-201ENST00000408535 133 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 OR51A9P-201ENST00000422578 911 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 RN7SL351P-201ENST00000469306 248 ntBASIC12.43□□□□□ -0.42
NPIPA3F8WFD2 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 318 ms