Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CAPN2P17655 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CAPN2P17655 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 STK24P1-201ENST00000455035 1291 ntBASIC15.81■□□□□ 0.12
CAPN2P17655 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 RPL13AP3-202ENST00000494676 1473 ntBASIC15.81■□□□□ 0.12
CAPN2P17655 ALG1L7P-201ENST00000502317 768 ntBASIC15.81■□□□□ 0.12
CAPN2P17655 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CAPN2P17655 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 PMEL-214ENST00000550447 901 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 AP000845.1-201ENST00000581677 2131 ntBASIC15.81■□□□□ 0.12
CAPN2P17655 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN2P17655 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 AC080013.5-201ENST00000607044 679 ntBASIC15.81■□□□□ 0.12
CAPN2P17655 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPN2P17655 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN2P17655 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN2P17655 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 SHMT1P1-201ENST00000419974 1312 ntBASIC15.8■□□□□ 0.12
CAPN2P17655 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 SNORA57-201ENST00000383870 149 ntBASIC15.8■□□□□ 0.12
CAPN2P17655 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.8■□□□□ 0.12
CAPN2P17655 AP000533.1-201ENST00000456143 1177 ntBASIC15.8■□□□□ 0.12
CAPN2P17655 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN2P17655 AC092896.1-201ENST00000465850 380 ntBASIC15.8■□□□□ 0.12
CAPN2P17655 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.8■□□□□ 0.12
CAPN2P17655 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN2P17655 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.8■□□□□ 0.12
CAPN2P17655 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN2P17655 AC018442.1-201ENST00000421439 2061 ntBASIC15.8■□□□□ 0.12
CAPN2P17655 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN2P17655 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN2P17655 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms