Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
TPM3P06753 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TPM3P06753 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.34■□□□□ 0.05
TPM3P06753 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.34■□□□□ 0.05
TPM3P06753 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 AC011742.3-201ENST00000439053 820 ntBASIC15.34■□□□□ 0.05
TPM3P06753 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.34■□□□□ 0.05
TPM3P06753 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.34■□□□□ 0.05
TPM3P06753 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.34■□□□□ 0.05
TPM3P06753 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.34■□□□□ 0.05
TPM3P06753 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.34■□□□□ 0.05
TPM3P06753 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.34■□□□□ 0.05
TPM3P06753 MIR4745-201ENST00000577608 62 ntBASIC15.34■□□□□ 0.05
TPM3P06753 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 AC092117.1-201ENST00000621230 3250 ntBASIC15.34■□□□□ 0.05
TPM3P06753 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
TPM3P06753 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC15.34■□□□□ 0.05
TPM3P06753 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC15.34■□□□□ 0.05
TPM3P06753 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TPM3P06753 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC15.33■□□□□ 0.05
TPM3P06753 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TPM3P06753 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
TPM3P06753 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TPM3P06753 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TPM3P06753 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TPM3P06753 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.33■□□□□ 0.04
TPM3P06753 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.33■□□□□ 0.04
TPM3P06753 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.33■□□□□ 0.04
TPM3P06753 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.33■□□□□ 0.04
TPM3P06753 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.33■□□□□ 0.04
TPM3P06753 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TPM3P06753 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SPCS2P1-201ENST00000561636 679 ntBASIC15.33■□□□□ 0.04
TPM3P06753 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.33■□□□□ 0.04
TPM3P06753 MIR4783-201ENST00000580343 82 ntBASIC15.33■□□□□ 0.04
TPM3P06753 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TPM3P06753 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 AC008132.1-202ENST00000342005 1389 ntBASIC15.33■□□□□ 0.04
TPM3P06753 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TPM3P06753 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC15.33■□□□□ 0.04
TPM3P06753 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 POM121L7P-201ENST00000329949 2404 ntBASIC15.33■□□□□ 0.04
TPM3P06753 AC026992.2-203ENST00000563004 2419 ntBASIC15.33■□□□□ 0.04
TPM3P06753 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC15.33■□□□□ 0.04
TPM3P06753 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TPM3P06753 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPM3P06753 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms