Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 MIR1307-201ENST00000408840 149 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 ACTG1P2-201ENST00000415776 1125 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 ACTG1P11-201ENST00000425411 1125 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 ACTBP11-201ENST00000436287 1126 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 AC073150.1-201ENST00000450406 1084 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.94□□□□□ -0.34
SCN2BO60939 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 AC090857.1-201ENST00000527400 390 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.94□□□□□ -0.34
SCN2BO60939 AL109837.1-201ENST00000603272 613 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.94□□□□□ -0.34
SCN2BO60939 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 MIR6752-201ENST00000618442 71 ntBASIC12.94□□□□□ -0.34
SCN2BO60939 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SCN2BO60939 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SCN2BO60939 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SCN2BO60939 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SCN2BO60939 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 LINC02228-202ENST00000641261 2489 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 CFL1P6-201ENST00000400899 494 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 RPL3P2-204ENST00000413027 1203 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 AL008707.1-201ENST00000422498 534 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.93□□□□□ -0.34
SCN2BO60939 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 POU5F1P2-201ENST00000521750 823 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.93□□□□□ -0.34
SCN2BO60939 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 AC026803.1-201ENST00000569130 274 ntBASIC12.93□□□□□ -0.34
SCN2BO60939 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.93□□□□□ -0.34
SCN2BO60939 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SCN2BO60939 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SCN2BO60939 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.93□□□□□ -0.34
SCN2BO60939 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SCN2BO60939 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCN2BO60939 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.92□□□□□ -0.34
SCN2BO60939 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SCN2BO60939 VENTXP1-201ENST00000569334 2716 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms