Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNIH4Q9P003 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CNIH4Q9P003 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AP003969.2-201ENST00000623739 2275 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC095040.1-201ENST00000513286 675 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MIR3147-201ENST00000577811 66 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 RN7SL470P-201ENST00000583069 259 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC087045.2-201ENST00000606279 1003 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC007250.1-201ENST00000608934 338 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 PCDHB19P-202ENST00000625133 2914 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AC024075.2-201ENST00000598112 1473 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 DLX4-206ENST00000611342 1662 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CNIH4Q9P003 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNIH4Q9P003 AL645937.6-201ENST00000641122 3727 ntBASIC12.82□□□□□ -0.36
CNIH4Q9P003 AL358781.1-202ENST00000321081 1360 ntBASIC12.81□□□□□ -0.36
CNIH4Q9P003 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNIH4Q9P003 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.81□□□□□ -0.36
CNIH4Q9P003 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms