Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AC106827.1-201ENST00000366454 431 ntBASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AL627231.1-201ENST00000394467 1125 ntBASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 ALG1L13P-202ENST00000519320 584 ntBASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AC100757.4-201ENST00000626934 759 ntBASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MAPK10-262ENST00000641051 5738 ntBASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AL008707.1-201ENST00000422498 534 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 MIR4326-201ENST00000582203 59 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AL008638.5-201ENST00000623814 1298 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 AL805961.1-203ENST00000641078 1258 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 CICP9-201ENST00000444451 1913 ntBASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
POLR2J2Q9GZM3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms