Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VGLL1Q99990 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 FAM90A11P-201ENST00000518378 2218 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AC110048.1-201ENST00000604293 2157 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TUBB2BP1-201ENST00000404155 871 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 AC099336.1-201ENST00000417053 1171 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 RPS9P1-201ENST00000419943 583 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 AC005034.1-201ENST00000426657 489 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 RPSAP36-202ENST00000494591 1261 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.42□□□□□ -0.74
VGLL1Q99990 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 AC005740.1-201ENST00000515639 522 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.42□□□□□ -0.74
VGLL1Q99990 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC10.42□□□□□ -0.74
VGLL1Q99990 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC10.42□□□□□ -0.74
VGLL1Q99990 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.42□□□□□ -0.74
VGLL1Q99990 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC063926.2-201ENST00000623766 1308 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 MIR1909-201ENST00000411312 80 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms