Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MAS1LP1-206ENST00000419416 1047 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 HNRNPA1P19-201ENST00000405292 370 ntBASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 AL627095.1-201ENST00000414775 321 ntBASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 AC023509.4-201ENST00000602306 775 ntBASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42BPAQ5VT25 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC107375.1-201ENST00000564464 2231 ntBASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC064836.1-201ENST00000405197 704 ntBASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC133548.2-202ENST00000562267 148 ntBASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 PRKN-210ENST00000612540 603 ntTSL 5 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42BPAQ5VT25 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 APRT-202ENST00000426324 664 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC015936.1-201ENST00000591013 1028 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 FAM223B-202ENST00000598177 713 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms