Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 IGHJ1P-201ENST00000450690 55 ntBASIC12.43□□□□□ -0.42
CACNA1BQ00975 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 LINC02166-201ENST00000567544 721 ntTSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AL353997.3-201ENST00000586597 589 ntBASIC12.43□□□□□ -0.42
CACNA1BQ00975 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 POM121L14P-201ENST00000406100 1558 ntBASIC12.43□□□□□ -0.42
CACNA1BQ00975 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC136621.1-201ENST00000624017 2304 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC091893.1-201ENST00000503772 399 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC106774.3-201ENST00000505444 169 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC244097.1-201ENST00000621631 1216 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 DANCR-205ENST00000623036 748 ntTSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 WDR78-202ENST00000371023 1697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 OR2I1P-209ENST00000641730 5365 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC091951.1-201ENST00000512854 2465 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC136475.6-201ENST00000533113 289 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 AC104506.1-201ENST00000609247 429 ntBASIC12.42□□□□□ -0.42
CACNA1BQ00975 RPS9-213ENST00000626547 476 ntTSL 2 BASIC12.42□□□□□ -0.42
CACNA1BQ00975 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CACNA1BQ00975 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AL365203.3-201ENST00000609742 2057 ntBASIC12.41□□□□□ -0.42
CACNA1BQ00975 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 TULP3P1-202ENST00000453253 1291 ntBASIC12.41□□□□□ -0.42
CACNA1BQ00975 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CACNA1BQ00975 MEG3-223ENST00000524131 721 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AC124254.1-201ENST00000583629 562 ntTSL 4 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CACNA1BQ00975 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms