Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.89□□□□□ -0.35
RAE1P78406 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAE1P78406 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.89□□□□□ -0.35
RAE1P78406 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.89□□□□□ -0.35
RAE1P78406 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RAE1P78406 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.89□□□□□ -0.35
RAE1P78406 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.89□□□□□ -0.35
RAE1P78406 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAE1P78406 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.89□□□□□ -0.35
RAE1P78406 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAE1P78406 AC004899.2-201ENST00000622993 3860 ntBASIC12.88□□□□□ -0.35
RAE1P78406 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.88□□□□□ -0.35
RAE1P78406 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.88□□□□□ -0.35
RAE1P78406 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.88□□□□□ -0.35
RAE1P78406 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 AL021578.1-201ENST00000613646 709 ntBASIC12.88□□□□□ -0.35
RAE1P78406 AC026120.2-201ENST00000617239 309 ntBASIC12.88□□□□□ -0.35
RAE1P78406 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAE1P78406 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAE1P78406 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAE1P78406 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 AC139491.6-202ENST00000637171 2077 ntBASIC12.87□□□□□ -0.35
RAE1P78406 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
RAE1P78406 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.87□□□□□ -0.35
RAE1P78406 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.87□□□□□ -0.35
RAE1P78406 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RAE1P78406 RN7SKP109-201ENST00000410592 316 ntBASIC12.87□□□□□ -0.35
RAE1P78406 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.87□□□□□ -0.35
RAE1P78406 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.87□□□□□ -0.35
RAE1P78406 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.87□□□□□ -0.35
RAE1P78406 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.87□□□□□ -0.35
RAE1P78406 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.87□□□□□ -0.35
RAE1P78406 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.87□□□□□ -0.35
RAE1P78406 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RAE1P78406 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAE1P78406 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.87□□□□□ -0.35
RAE1P78406 AC091181.1-201ENST00000623762 2098 ntBASIC12.87□□□□□ -0.35
RAE1P78406 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms