Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 RGS22-218ENST00000617334 4253 ntTSL 5 BASIC8.59□□□□□ -1.03
PCP4P48539 DDX10-201ENST00000322536 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC8.59□□□□□ -1.03
PCP4P48539 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 FRMPD2-202ENST00000374201 4997 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 BTD-206ENST00000437172 2097 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC8.59□□□□□ -1.03
PCP4P48539 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 SPI1-203ENST00000533030 661 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC8.59□□□□□ -1.03
PCP4P48539 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 AL035685.1-201ENST00000636663 812 ntBASIC8.59□□□□□ -1.03
PCP4P48539 SFTPA1-201ENST00000398636 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 ARMC8-204ENST00000461822 2221 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PCP4P48539 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PCP4P48539 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.59□□□□□ -1.03
PCP4P48539 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PCP4P48539 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PCP4P48539 DDC-212ENST00000615193 1674 ntTSL 3 BASIC8.59□□□□□ -1.03
PCP4P48539 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 ZNF547-201ENST00000282282 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PCP4P48539 KIF9-201ENST00000265529 3311 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
PCP4P48539 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 CTCFL-216ENST00000608263 4040 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 CARMN-201ENST00000505254 3950 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 WDPCP-201ENST00000272321 3392 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 AL357509.1-201ENST00000641892 2013 ntBASIC8.58□□□□□ -1.04
PCP4P48539 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 CACNB4-246ENST00000637309 7409 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 PDE6H-201ENST00000266395 747 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 RNU6-673P-201ENST00000365084 104 ntBASIC8.58□□□□□ -1.04
PCP4P48539 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 AL023284.2-201ENST00000405850 579 ntBASIC8.58□□□□□ -1.04
PCP4P48539 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC8.58□□□□□ -1.04
PCP4P48539 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC8.58□□□□□ -1.04
PCP4P48539 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC8.58□□□□□ -1.04
PCP4P48539 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
PCP4P48539 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC8.58□□□□□ -1.04
PCP4P48539 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 AC093028.1-201ENST00000622998 982 ntBASIC8.58□□□□□ -1.04
PCP4P48539 ABBA01031661.1-201ENST00000634362 1253 ntBASIC8.58□□□□□ -1.04
PCP4P48539 VPS72-207ENST00000640458 689 ntTSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 AC087762.2-201ENST00000639346 3773 ntBASIC8.58□□□□□ -1.04
PCP4P48539 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PCP4P48539 HNRNPRP1-201ENST00000453465 1695 ntBASIC8.58□□□□□ -1.04
PCP4P48539 ZNF625-203ENST00000455799 1678 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 LIPC-AS1-201ENST00000561083 2231 ntTSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PCP4P48539 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PCP4P48539 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms