Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 AC006372.4-201ENST00000624122 1543 ntBASIC14.21□□□□□ -0.13
MMP13P45452 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 UPF3AP2-201ENST00000457924 1132 ntBASIC14.21□□□□□ -0.13
MMP13P45452 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.21□□□□□ -0.13
MMP13P45452 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.21□□□□□ -0.13
MMP13P45452 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.21□□□□□ -0.13
MMP13P45452 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 AC009145.4-201ENST00000625119 1294 ntBASIC14.21□□□□□ -0.13
MMP13P45452 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MMP13P45452 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MMP13P45452 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.21□□□□□ -0.13
MMP13P45452 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.21□□□□□ -0.14
MMP13P45452 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MMP13P45452 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.21□□□□□ -0.14
MMP13P45452 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP13P45452 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MMP13P45452 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MMP13P45452 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MMP13P45452 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 AL627231.1-201ENST00000394467 1125 ntBASIC14.2□□□□□ -0.14
MMP13P45452 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.2□□□□□ -0.14
MMP13P45452 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.2□□□□□ -0.14
MMP13P45452 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.2□□□□□ -0.14
MMP13P45452 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
MMP13P45452 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.2□□□□□ -0.14
MMP13P45452 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MMP13P45452 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.2□□□□□ -0.14
MMP13P45452 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms