Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHRM3P20309 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
CHRM3P20309 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.65□□□□□ -0.22
CHRM3P20309 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.65□□□□□ -0.22
CHRM3P20309 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRM3P20309 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRM3P20309 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 AC011481.3-201ENST00000623895 5594 ntBASIC13.65□□□□□ -0.22
CHRM3P20309 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CHRM3P20309 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRM3P20309 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CHRM3P20309 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 AL662890.1-201ENST00000396818 632 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRM3P20309 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 IGLV3-15-201ENST00000518356 244 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.64□□□□□ -0.23
CHRM3P20309 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRM3P20309 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRM3P20309 AP005264.5-201ENST00000590066 467 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.64□□□□□ -0.23
CHRM3P20309 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 AC009145.4-201ENST00000625119 1294 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 AL139099.5-201ENST00000635274 300 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 AC006453.1-201ENST00000636037 1257 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.64□□□□□ -0.23
CHRM3P20309 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.64□□□□□ -0.23
CHRM3P20309 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRM3P20309 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.64□□□□□ -0.23
CHRM3P20309 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRM3P20309 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRM3P20309 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms