Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
CTLA4P16410 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CTLA4P16410 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 AL512306.1-201ENST00000432698 848 ntBASIC12.11□□□□□ -0.47
CTLA4P16410 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 AC018638.5-201ENST00000450885 754 ntBASIC12.11□□□□□ -0.47
CTLA4P16410 STK24P1-201ENST00000455035 1291 ntBASIC12.11□□□□□ -0.47
CTLA4P16410 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.11□□□□□ -0.47
CTLA4P16410 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.11□□□□□ -0.47
CTLA4P16410 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.11□□□□□ -0.47
CTLA4P16410 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 Z82244.1-201ENST00000631502 840 ntBASIC12.11□□□□□ -0.47
CTLA4P16410 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 CICP1-201ENST00000416803 2410 ntBASIC12.11□□□□□ -0.47
CTLA4P16410 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CTLA4P16410 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CTLA4P16410 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTLA4P16410 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CTLA4P16410 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.1□□□□□ -0.47
CTLA4P16410 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.1□□□□□ -0.47
CTLA4P16410 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CTLA4P16410 AC244107.1-201ENST00000442033 332 ntBASIC12.1□□□□□ -0.47
CTLA4P16410 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 ERP29P1-201ENST00000442902 706 ntBASIC12.1□□□□□ -0.47
CTLA4P16410 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.1□□□□□ -0.47
CTLA4P16410 NDUFS6P1-201ENST00000485187 316 ntBASIC12.1□□□□□ -0.47
CTLA4P16410 RN7SL564P-201ENST00000496309 250 ntBASIC12.1□□□□□ -0.47
CTLA4P16410 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.1□□□□□ -0.47
CTLA4P16410 KRT8P2-201ENST00000556193 944 ntBASIC12.1□□□□□ -0.47
CTLA4P16410 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.1□□□□□ -0.47
CTLA4P16410 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.1□□□□□ -0.47
CTLA4P16410 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.1□□□□□ -0.47
CTLA4P16410 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CTLA4P16410 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CTLA4P16410 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms