Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 MBL3P-201ENST00000402234 644 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 AC139143.1-201ENST00000441772 1207 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 OR2A15P-201ENST00000463814 900 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 RBP1-206ENST00000617459 667 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 AC010182.1-201ENST00000548943 2434 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 RPS6-201ENST00000315377 863 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 KRTAP9-10P-201ENST00000435672 207 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 RN7SL732P-201ENST00000581157 300 ntBASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42BPAQ5VT25 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 MTND6P7-201ENST00000433237 524 ntBASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 EEF1GP2-201ENST00000509352 1243 ntBASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 AL139424.2-202ENST00000641335 1369 ntBASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 AL359881.3-201ENST00000602640 1721 ntBASIC19.72■□□□□ 0.75
CDC42BPAQ5VT25 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC083873.1-201ENST00000421179 1099 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 CYP4F60P-201ENST00000439449 549 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC073465.1-201ENST00000456671 464 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 LDHAL6CP-201ENST00000502352 1142 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 AC026271.4-201ENST00000578214 1833 ntBASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 JAML-211ENST00000533261 1508 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42BPAQ5VT25 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms