Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AQP7P1-201ENST00000412626 1045 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AL929472.4-201ENST00000447422 691 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 RN7SL681P-201ENST00000482763 292 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 RN7SKP195-201ENST00000516587 303 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AZU1P1-201ENST00000603479 385 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AL591926.3-201ENST00000611630 238 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC091905.3-201ENST00000624959 234 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AMD1P4-201ENST00000299540 1345 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 CRPP1-201ENST00000412857 625 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC003072.1-201ENST00000510957 612 ntBASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 KXD1-210ENST00000599000 498 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 CARS-216ENST00000639317 135 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS13DQ5THJ4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC006144.1-201ENST00000424220 1600 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MED15P7-201ENST00000435410 822 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PRKN-210ENST00000612540 603 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC010776.3-201ENST00000617349 424 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MIR941-1-201ENST00000636396 72 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC245297.1-201ENST00000313342 933 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 KRT18P39-201ENST00000415349 1299 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC009238.3-201ENST00000512705 217 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 IGHV3-60-201ENST00000521678 354 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AL121992.3-201ENST00000606186 346 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms