Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 AL391647.1-201ENST00000395664 511 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 RPL18AP16-201ENST00000424057 531 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 CDCA4P4-201ENST00000435216 680 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 KRT19P4-201ENST00000443208 943 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 AC010202.1-201ENST00000551181 405 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.96■□□□□ 0.15
HLA-DOAP06340 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DOAP06340 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DOAP06340 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DOAP06340 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
HLA-DOAP06340 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DOAP06340 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.96■□□□□ 0.14
HLA-DOAP06340 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
HLA-DOAP06340 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC15.96■□□□□ 0.14
HLA-DOAP06340 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 GBAP1-208ENST00000566701 1546 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 PI4KAP2-201ENST00000360806 2080 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 KRT8P30-201ENST00000432100 650 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 CCND3P1-201ENST00000438347 580 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 RPSAP70-201ENST00000504462 864 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 RNA5SP420-201ENST00000516997 137 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 MIR5001-201ENST00000580185 100 ntBASIC15.95■□□□□ 0.14
HLA-DOAP06340 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DOAP06340 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DOAP06340 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AL137244.1-201ENST00000422931 865 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms