Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
P04436 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
P04436 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.48□□□□□ -0.41
P04436 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P04436 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.48□□□□□ -0.41
P04436 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.48□□□□□ -0.41
P04436 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.48□□□□□ -0.41
P04436 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P04436 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
P04436 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
P04436 ZNF493-208ENST00000599461 1769 ntBASIC12.48□□□□□ -0.41
P04436 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
P04436 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
P04436 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
P04436 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P04436 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
P04436 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
P04436 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
P04436 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 AC103563.1-201ENST00000429316 123 ntBASIC12.47□□□□□ -0.41
P04436 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.47□□□□□ -0.41
P04436 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.47□□□□□ -0.41
P04436 AC024293.1-201ENST00000467930 498 ntBASIC12.47□□□□□ -0.41
P04436 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 ALG1L3P-201ENST00000503331 765 ntBASIC12.47□□□□□ -0.41
P04436 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
P04436 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
P04436 AC006483.2-201ENST00000609813 515 ntBASIC12.47□□□□□ -0.41
P04436 AC006158.1-201ENST00000610661 249 ntBASIC12.47□□□□□ -0.41
P04436 AC026120.2-201ENST00000617239 309 ntBASIC12.47□□□□□ -0.41
P04436 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.47□□□□□ -0.41
P04436 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04436 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P04436 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.47□□□□□ -0.41
P04436 LINC00638-201ENST00000555578 2518 ntBASIC12.47□□□□□ -0.41
P04436 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
P04436 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms