Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AL021578.1-201ENST00000613646 709 ntBASIC13.92□□□□□ -0.18
HACD3Q9P035 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.92□□□□□ -0.18
HACD3Q9P035 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
HACD3Q9P035 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.92□□□□□ -0.18
HACD3Q9P035 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 ODCP-201ENST00000459650 1639 ntBASIC13.92□□□□□ -0.18
HACD3Q9P035 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.92□□□□□ -0.18
HACD3Q9P035 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.92□□□□□ -0.18
HACD3Q9P035 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HACD3Q9P035 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HACD3Q9P035 AC019109.1-201ENST00000401725 1874 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HACD3Q9P035 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
HACD3Q9P035 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 DKKL1P1-201ENST00000400550 698 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 AL627422.1-201ENST00000434104 580 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.91□□□□□ -0.18
HACD3Q9P035 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.91□□□□□ -0.18
HACD3Q9P035 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.91□□□□□ -0.18
HACD3Q9P035 ORAOV1P1-201ENST00000503108 395 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.91□□□□□ -0.18
HACD3Q9P035 OR5BD1P-201ENST00000532527 817 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.91□□□□□ -0.18
HACD3Q9P035 SNORD3B-1-201ENST00000577988 758 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.91□□□□□ -0.18
HACD3Q9P035 MIR2392-201ENST00000584881 84 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 MIR4522-201ENST00000584932 87 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AC005632.3-201ENST00000605544 308 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AC012073.1-201ENST00000606114 1108 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AC103810.10-201ENST00000606504 343 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 AC084346.2-201ENST00000607097 949 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 AC005014.1-201ENST00000432006 2976 ntBASIC13.91□□□□□ -0.18
HACD3Q9P035 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.91□□□□□ -0.18
HACD3Q9P035 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HACD3Q9P035 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HACD3Q9P035 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 GGTLC4P-201ENST00000402176 664 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 RPL3P2-204ENST00000413027 1203 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 AC022494.1-201ENST00000466044 728 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 AC019193.1-201ENST00000506678 823 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.9□□□□□ -0.18
HACD3Q9P035 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.9□□□□□ -0.18
HACD3Q9P035 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms