Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB40CQ96S21 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB40CQ96S21 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.15□□□□□ -0.63
RAB40CQ96S21 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.15□□□□□ -0.63
RAB40CQ96S21 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
RAB40CQ96S21 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB40CQ96S21 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
RAB40CQ96S21 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 LINC02228-202ENST00000641261 2489 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC134407.3-201ENST00000624035 2139 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC006001.1-201ENST00000325130 474 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 TMEM14DP-201ENST00000422205 345 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 KRT43P-201ENST00000434019 910 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC007279.1-201ENST00000448547 837 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC100827.2-201ENST00000563214 1194 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 MIR3940-201ENST00000579148 102 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC005962.1-201ENST00000584100 773 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 AC012645.4-201ENST00000610691 1061 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.14□□□□□ -0.63
RAB40CQ96S21 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
RAB40CQ96S21 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB40CQ96S21 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms