Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 MME-218ENST00000625667 363 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 AL139823.1-201ENST00000641871 1225 ntBASIC20.86■□□□□ 0.93
VPS8Q8N3P4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS8Q8N3P4 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 AC093700.1-201ENST00000503348 717 ntBASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 MIR4687-201ENST00000583618 80 ntBASIC20.85■□□□□ 0.93
VPS8Q8N3P4 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 FRG2EP-201ENST00000634243 835 ntBASIC20.85■□□□□ 0.93
VPS8Q8N3P4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS8Q8N3P4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AFG3L2P1-201ENST00000521792 1763 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 IQCF4-203ENST00000428561 420 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 VTI1BP1-201ENST00000486325 700 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AC120498.7-201ENST00000562876 330 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 PRR20FP-201ENST00000603320 180 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AC124319.4-201ENST00000622931 2161 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS8Q8N3P4 AP003969.2-201ENST00000623739 2275 ntBASIC20.84■□□□□ 0.93
VPS8Q8N3P4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 ANKRD20A7P-201ENST00000402318 2414 ntBASIC20.83■□□□□ 0.93
VPS8Q8N3P4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 RBMXP1-201ENST00000408004 1191 ntBASIC20.83■□□□□ 0.93
VPS8Q8N3P4 GAPDHP29-201ENST00000429913 985 ntBASIC20.83■□□□□ 0.93
VPS8Q8N3P4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 RPSAP67-201ENST00000584105 862 ntBASIC20.83■□□□□ 0.93
VPS8Q8N3P4 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS8Q8N3P4 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms