Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AP002761.4-201ENST00000565433 3361 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 RPL7P35-201ENST00000446943 740 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC025186.1-201ENST00000478174 870 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC093300.1-201ENST00000510368 1201 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 RNA5SP406-201ENST00000516106 112 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 IGHV1-12-201ENST00000518307 205 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC068867.1-201ENST00000559855 150 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 NUDT4P2-201ENST00000578341 546 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 RN7SL357P-201ENST00000581065 298 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC087045.2-201ENST00000606279 1003 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 MIR6842-201ENST00000612539 65 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 LINC00244-201ENST00000625073 613 ntBASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD3Q7Z3D4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 PCDHB18P-202ENST00000526308 3197 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms