Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SLC1A1P43005 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 PDIA3P2-201ENST00000428073 158 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 SPTLC1P5-201ENST00000450718 252 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC1A1P43005 AKR7A2P1-201ENST00000460134 915 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 KRT8P13-201ENST00000463294 1010 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 DNM1P51-201ENST00000558149 522 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 MIR4754-201ENST00000582477 89 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC1A1P43005 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 AC243960.2-201ENST00000600996 747 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC1A1P43005 AC009145.4-201ENST00000625119 1294 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 Z82244.1-201ENST00000631502 840 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 CICP1-201ENST00000416803 2410 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.3□□□□□ -0.12
SLC1A1P43005 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SLC1A1P43005 CFL1P6-201ENST00000400899 494 ntBASIC14.3□□□□□ -0.12
SLC1A1P43005 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AC018638.5-201ENST00000450885 754 ntBASIC14.3□□□□□ -0.12
SLC1A1P43005 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AP000358.1-201ENST00000456260 156 ntBASIC14.3□□□□□ -0.12
SLC1A1P43005 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A1P43005 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A1P43005 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC1A1P43005 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC1A1P43005 MIR6752-201ENST00000618442 71 ntBASIC14.3□□□□□ -0.12
SLC1A1P43005 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A1P43005 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A1P43005 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SLC1A1P43005 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A1P43005 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms