Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.292e-7■□□□□ 10.6
U2AF2P26368 ASCC2-207ENST00000453160 529 ntTSL 416.56■□□□□ 0.242e-7■□□□□ 10.6
U2AF2P26368 INF2-201ENST00000252527 3050 ntTSL 216.33■□□□□ 0.22e-7■□□□□ 10.6
U2AF2P26368 COA7-202ENST00000486918 908 ntTSL 316.31■□□□□ 0.22e-7■□□□□ 10.6
U2AF2P26368 IRAK1-207ENST00000443220 1175 ntTSL 216.19■□□□□ 0.182e-7■□□□□ 10.6
U2AF2P26368 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.182e-7■□□□□ 10.6
U2AF2P26368 USP40-214ENST00000483519 2722 ntTSL 1 (best)15.83■□□□□ 0.122e-7■□□□□ 10.6
U2AF2P26368 IRAK1-206ENST00000437278 862 ntTSL 515.67■□□□□ 0.12e-7■□□□□ 10.6
U2AF2P26368 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.072e-7■□□□□ 10.6
U2AF2P26368 RNF31-214ENST00000559449 808 ntTSL 514.95□□□□□ -0.022e-7■□□□□ 10.6
U2AF2P26368 RNF31-218ENST00000559719 579 ntTSL 314.69□□□□□ -0.062e-7■□□□□ 10.6
U2AF2P26368 IRAK1-213ENST00000477274 705 ntTSL 514.62□□□□□ -0.072e-7■□□□□ 10.6
U2AF2P26368 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.132e-7■□□□□ 10.6
U2AF2P26368 RNF31-202ENST00000483895 660 ntTSL 314.05□□□□□ -0.162e-7■□□□□ 10.6
U2AF2P26368 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC13.91□□□□□ -0.182e-7■□□□□ 10.6
U2AF2P26368 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC13.62□□□□□ -0.232e-7■□□□□ 10.6
U2AF2P26368 CPVL-207ENST00000448959 874 ntTSL 213.62□□□□□ -0.232e-7■□□□□ 10.6
U2AF2P26368 FNTA-209ENST00000531266 590 ntTSL 513.59□□□□□ -0.232e-7■□□□□ 10.6
U2AF2P26368 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.252e-7■□□□□ 10.6
U2AF2P26368 USP40-210ENST00000454354 348 ntTSL 213.43□□□□□ -0.262e-7■□□□□ 10.6
U2AF2P26368 ASCC2-209ENST00000458594 2753 ntTSL 513.31□□□□□ -0.282e-7■□□□□ 10.6
U2AF2P26368 FNTA-211ENST00000533368 534 ntTSL 213.29□□□□□ -0.282e-7■□□□□ 10.6
U2AF2P26368 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.382e-7■□□□□ 10.6
U2AF2P26368 RNF31-215ENST00000559491 478 ntTSL 212.64□□□□□ -0.392e-7■□□□□ 10.6
U2AF2P26368 CPVL-204ENST00000432534 679 ntTSL 312.59□□□□□ -0.392e-7■□□□□ 10.6
U2AF2P26368 RERE-217ENST00000507012 418 ntTSL 512.28□□□□□ -0.442e-7■□□□□ 10.6
U2AF2P26368 ASCC2-211ENST00000462454 491 ntTSL 311.95□□□□□ -0.52e-7■□□□□ 10.6
U2AF2P26368 EEF2-203ENST00000596417 218 ntTSL 211.54□□□□□ -0.561e-10■□□□□ 10.6
U2AF2P26368 CTDSPL-207ENST00000447745 793 ntTSL 311.38□□□□□ -0.592e-7■□□□□ 10.6
U2AF2P26368 ZNF496-203ENST00000462139 9243 ntTSL 1 (best)11.27□□□□□ -0.63e-8■□□□□ 10.6
U2AF2P26368 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-7■□□□□ 10.6
U2AF2P26368 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.641e-20■□□□□ 10.6
U2AF2P26368 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.681e-10■□□□□ 10.6
U2AF2P26368 ASCC2-205ENST00000431535 873 ntTSL 510.64□□□□□ -0.712e-7■□□□□ 10.6
U2AF2P26368 TKFC-220ENST00000534134 585 ntTSL 310.56□□□□□ -0.722e-7■□□□□ 10.6
U2AF2P26368 ASCC2-204ENST00000412689 742 ntTSL 310.49□□□□□ -0.732e-7■□□□□ 10.6
U2AF2P26368 ASCC2-214ENST00000465667 876 ntTSL 310.49□□□□□ -0.732e-7■□□□□ 10.6
U2AF2P26368 GCLC-208ENST00000513939 519 ntTSL 210.36□□□□□ -0.756e-9■□□□□ 10.6
U2AF2P26368 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC10.19□□□□□ -0.789e-7■□□□□ 10.6
U2AF2P26368 ZNF496-202ENST00000461277 3857 ntTSL 1 (best)10.02□□□□□ -0.813e-8■□□□□ 10.6
U2AF2P26368 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC9.92□□□□□ -0.829e-7■□□□□ 10.6
U2AF2P26368 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC9.92□□□□□ -0.829e-7■□□□□ 10.6
U2AF2P26368 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.862e-7■□□□□ 10.6
U2AF2P26368 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.931e-20■□□□□ 10.6
U2AF2P26368 SLC22A9-202ENST00000536333 1558 ntTSL 1 (best)9.23□□□□□ -0.932e-7■□□□□ 10.6
U2AF2P26368 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.951e-10■□□□□ 10.6
U2AF2P26368 RNF31-222ENST00000560631 320 ntTSL 29.12□□□□□ -0.952e-7■□□□□ 10.6
U2AF2P26368 RPL27-202ENST00000586277 460 ntTSL 38.96□□□□□ -0.981e-10■□□□□ 10.6
U2AF2P26368 FNTA-213ENST00000533559 429 ntTSL 38.93□□□□□ -0.982e-7■□□□□ 10.6
U2AF2P26368 RPL27-204ENST00000588830 318 ntTSL 28.93□□□□□ -0.981e-10■□□□□ 10.6
U2AF2P26368 FNTA-210ENST00000533336 874 ntTSL 38.29□□□□□ -1.082e-7■□□□□ 10.6
U2AF2P26368 ASCC2-216ENST00000477074 554 ntTSL 46.88□□□□□ -1.312e-7■□□□□ 10.6
U2AF2P26368 GCLC-205ENST00000505294 847 ntTSL 35.61□□□□□ -1.516e-9■□□□□ 10.6
U2AF2P26368 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.51□□□□□ -1.532e-7■□□□□ 10.6
U2AF2P26368 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.35□□□□□ -1.551e-10■□□□□ 10.6
U2AF2P26368 GCLC-211ENST00000514933 542 ntTSL 54.43□□□□□ -1.76e-9■□□□□ 10.6
U2AF2P26368 CPVL-210ENST00000455893 561 ntTSL 53.88□□□□□ -1.792e-7■□□□□ 10.6
U2AF2P26368 SRP54-209ENST00000555746 558 ntTSL 42.79□□□□□ -1.965e-7■□□□□ 10.6
U2AF2P26368 TXNDC9-204ENST00000422767 768 ntTSL 51.66□□□□□ -2.142e-7■□□□□ 10.6
U2AF2P26368 SRP54-207ENST00000555535 552 ntTSL 40.71□□□□□ -2.35e-7■□□□□ 10.6
U2AF2P26368 ZMYM4-205ENST00000482131 640 ntTSL 23.41□□□□□ -1.861e-6■□□□□ 10.6
U2AF2P26368 ADGRA3-203ENST00000499527 3968 ntTSL 1 (best)5.75□□□□□ -1.492e-10■□□□□ 10.5
U2AF2P26368 ATXN7L3-205ENST00000587097 1341 ntTSL 533.59■■■□□ 2.979e-7■□□□□ 10.5
U2AF2P26368 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.259e-7■□□□□ 10.5
U2AF2P26368 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.319e-7■□□□□ 10.5
U2AF2P26368 ATXN7L3-212ENST00000593073 527 ntTSL 49.2□□□□□ -0.949e-7■□□□□ 10.5
U2AF2P26368 PAPOLA-214ENST00000555508 588 ntTSL 24.17□□□□□ -1.745e-13■□□□□ 10.5
U2AF2P26368 PAPOLA-206ENST00000553940 454 ntTSL 22.5□□□□□ -2.015e-13■□□□□ 10.5
U2AF2P26368 ZNF780A-207ENST00000595773 546 ntTSL 518.54■□□□□ 0.565e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-209ENST00000599972 498 ntTSL 216.64■□□□□ 0.255e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.655e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.665e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.295e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.385e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-211ENST00000601715 446 ntTSL 25.82□□□□□ -1.485e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-208ENST00000599368 665 ntTSL 25.61□□□□□ -1.515e-7■□□□□ 10.5
U2AF2P26368 ZNF780A-210ENST00000601688 467 ntTSL 1 (best)4.14□□□□□ -1.755e-7■□□□□ 10.5
U2AF2P26368 ACSS2-207ENST00000470315 623 ntTSL 311.12□□□□□ -0.632e-6■□□□□ 10.5
U2AF2P26368 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.95□□□□□ -1.32e-6■□□□□ 10.5
U2AF2P26368 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)14.49□□□□□ -0.092e-7■□□□□ 10.5
U2AF2P26368 APTX-231ENST00000494973 547 ntTSL 415.51■□□□□ 0.072e-7■□□□□ 10.5
U2AF2P26368 COA1-208ENST00000431651 720 ntAPPRIS ALT2 TSL 312.3□□□□□ -0.448e-10■□□□□ 10.5
U2AF2P26368 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.31e-6■□□□□ 10.5
U2AF2P26368 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.25□□□□□ -1.091e-6■□□□□ 10.5
U2AF2P26368 BCL6-203ENST00000419510 4178 ntTSL 210.2□□□□□ -0.781e-6■□□□□ 10.5
U2AF2P26368 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.881e-6■□□□□ 10.5
U2AF2P26368 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.624e-6■□□□□ 10.5
U2AF2P26368 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 515.38■□□□□ 0.054e-6■□□□□ 10.5
U2AF2P26368 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.184e-6■□□□□ 10.5
U2AF2P26368 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.294e-6■□□□□ 10.5
U2AF2P26368 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.01□□□□□ -2.093e-11■□□□□ 10.5
U2AF2P26368 TARDBP-231ENST00000639599 1283 ntTSL 516.07■□□□□ 0.162e-10■□□□□ 10.5
U2AF2P26368 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC14.59□□□□□ -0.072e-10■□□□□ 10.5
U2AF2P26368 TARDBP-206ENST00000473869 1946 ntTSL 512.52□□□□□ -0.412e-10■□□□□ 10.5
U2AF2P26368 TARDBP-221ENST00000619555 682 ntTSL 512.28□□□□□ -0.442e-10■□□□□ 10.5
U2AF2P26368 TARDBP-213ENST00000611963 739 ntTSL 59.3□□□□□ -0.922e-10■□□□□ 10.5
U2AF2P26368 TARDBP-216ENST00000614494 515 ntTSL 57.94□□□□□ -1.142e-10■□□□□ 10.5
U2AF2P26368 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.63e-9■□□□□ 10.5
U2AF2P26368 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)23.62■■□□□ 1.373e-9■□□□□ 10.5
U2AF2P26368 SSUH2-204ENST00000415132 1645 ntTSL 522.27■■□□□ 1.163e-9■□□□□ 10.5
Retrieved 100 of 36,523 protein–RNA pairs in 423 ms