RNA–Protein interactions for RNA: ENST00000553940.1

PAPOLA-206, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 454 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-206ENST00000553940 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
PAPOLA-206ENST00000553940 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
PAPOLA-206ENST00000553940 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
PAPOLA-206ENST00000553940 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
PAPOLA-206ENST00000553940 FOXD1Q16676 465 aa19.65■□□□□ 0.74
PAPOLA-206ENST00000553940 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
PAPOLA-206ENST00000553940 MSH5O43196 834 aa18.68■□□□□ 0.58
PAPOLA-206ENST00000553940 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
PAPOLA-206ENST00000553940 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
PAPOLA-206ENST00000553940 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
PAPOLA-206ENST00000553940 ADRA2BP18089 450 aa17.94■□□□□ 0.46
PAPOLA-206ENST00000553940 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
PAPOLA-206ENST00000553940 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
PAPOLA-206ENST00000553940 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
PAPOLA-206ENST00000553940 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
PAPOLA-206ENST00000553940 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
PAPOLA-206ENST00000553940 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
PAPOLA-206ENST00000553940 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
PAPOLA-206ENST00000553940 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
PAPOLA-206ENST00000553940 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
PAPOLA-206ENST00000553940 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
PAPOLA-206ENST00000553940 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
PAPOLA-206ENST00000553940 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
PAPOLA-206ENST00000553940 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
PAPOLA-206ENST00000553940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■□□□□ 8.5
PAPOLA-206ENST00000553940 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
PAPOLA-206ENST00000553940 POTEHQ6S545 545 aa14.75□□□□□ -0.05
PAPOLA-206ENST00000553940 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
PAPOLA-206ENST00000553940 CAPN15O75808 1086 aa14.71□□□□□ -0.05
PAPOLA-206ENST00000553940 DSG3P32926 999 aa14.67□□□□□ -0.06
PAPOLA-206ENST00000553940 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
PAPOLA-206ENST00000553940 APLP2Q06481 763 aa14.44□□□□□ -0.1
PAPOLA-206ENST00000553940 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
PAPOLA-206ENST00000553940 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
PAPOLA-206ENST00000553940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
PAPOLA-206ENST00000553940 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
PAPOLA-206ENST00000553940 ABCB7O75027 752 aa14.27□□□□□ -0.13
PAPOLA-206ENST00000553940 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
PAPOLA-206ENST00000553940 KCNA4P22459 653 aa14.16□□□□□ -0.14
PAPOLA-206ENST00000553940 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
PAPOLA-206ENST00000553940 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
PAPOLA-206ENST00000553940 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
PAPOLA-206ENST00000553940 POLA2Q14181 598 aa13.84□□□□□ -0.19
PAPOLA-206ENST00000553940 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
PAPOLA-206ENST00000553940 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
PAPOLA-206ENST00000553940 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
PAPOLA-206ENST00000553940 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
PAPOLA-206ENST00000553940 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
PAPOLA-206ENST00000553940 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
PAPOLA-206ENST00000553940 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
PAPOLA-206ENST00000553940 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
PAPOLA-206ENST00000553940 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
PAPOLA-206ENST00000553940 HAX1O00165 279 aa13.38□□□□□ -0.27
PAPOLA-206ENST00000553940 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
PAPOLA-206ENST00000553940 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
PAPOLA-206ENST00000553940 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
PAPOLA-206ENST00000553940 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
PAPOLA-206ENST00000553940 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
PAPOLA-206ENST00000553940 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
PAPOLA-206ENST00000553940 FBLN2P98095 1184 aa13.09□□□□□ -0.31
PAPOLA-206ENST00000553940 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
PAPOLA-206ENST00000553940 EVX2Q03828 476 aa13.05□□□□□ -0.32
PAPOLA-206ENST00000553940 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
PAPOLA-206ENST00000553940 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
PAPOLA-206ENST00000553940 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
PAPOLA-206ENST00000553940 ZBTB22O15209 634 aa12.94□□□□□ -0.34
PAPOLA-206ENST00000553940 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
PAPOLA-206ENST00000553940 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
PAPOLA-206ENST00000553940 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
PAPOLA-206ENST00000553940 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
PAPOLA-206ENST00000553940 GABBR2O75899 941 aa12.82□□□□□ -0.36
PAPOLA-206ENST00000553940 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
PAPOLA-206ENST00000553940 LHX8Q68G74 356 aa12.78□□□□□ -0.36
PAPOLA-206ENST00000553940 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
PAPOLA-206ENST00000553940 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
PAPOLA-206ENST00000553940 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
PAPOLA-206ENST00000553940 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
PAPOLA-206ENST00000553940 CLCN6P51797 869 aa12.59□□□□□ -0.39
PAPOLA-206ENST00000553940 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
PAPOLA-206ENST00000553940 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
PAPOLA-206ENST00000553940 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
PAPOLA-206ENST00000553940 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
PAPOLA-206ENST00000553940 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
PAPOLA-206ENST00000553940 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
PAPOLA-206ENST00000553940 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
PAPOLA-206ENST00000553940 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
PAPOLA-206ENST00000553940 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
PAPOLA-206ENST00000553940 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
PAPOLA-206ENST00000553940 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
PAPOLA-206ENST00000553940 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
PAPOLA-206ENST00000553940 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
PAPOLA-206ENST00000553940 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
PAPOLA-206ENST00000553940 POTEMA6NI47 508 aa12.06□□□□□ -0.48
PAPOLA-206ENST00000553940 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
PAPOLA-206ENST00000553940 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
PAPOLA-206ENST00000553940 POTEGQ6S5H5 508 aa12□□□□□ -0.49
PAPOLA-206ENST00000553940 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
PAPOLA-206ENST00000553940 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
PAPOLA-206ENST00000553940 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
PAPOLA-206ENST00000553940 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms