RNA–Protein interactions for RNA: ENST00000555508.1

PAPOLA-214, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-214ENST00000555508 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
PAPOLA-214ENST00000555508 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
PAPOLA-214ENST00000555508 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
PAPOLA-214ENST00000555508 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
PAPOLA-214ENST00000555508 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
PAPOLA-214ENST00000555508 FOXD1Q16676 465 aa18.34■□□□□ 0.53
PAPOLA-214ENST00000555508 ADRA2BP18089 450 aa18.32■□□□□ 0.52
PAPOLA-214ENST00000555508 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
PAPOLA-214ENST00000555508 KCNA4P22459 653 aa17.78■□□□□ 0.44
PAPOLA-214ENST00000555508 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
PAPOLA-214ENST00000555508 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
PAPOLA-214ENST00000555508 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
PAPOLA-214ENST00000555508 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
PAPOLA-214ENST00000555508 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
PAPOLA-214ENST00000555508 MSH5O43196 834 aa17.02■□□□□ 0.32
PAPOLA-214ENST00000555508 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
PAPOLA-214ENST00000555508 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
PAPOLA-214ENST00000555508 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
PAPOLA-214ENST00000555508 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
PAPOLA-214ENST00000555508 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
PAPOLA-214ENST00000555508 ZBTB22O15209 634 aa16.36■□□□□ 0.21
PAPOLA-214ENST00000555508 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
PAPOLA-214ENST00000555508 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
PAPOLA-214ENST00000555508 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
PAPOLA-214ENST00000555508 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
PAPOLA-214ENST00000555508 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
PAPOLA-214ENST00000555508 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
PAPOLA-214ENST00000555508 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
PAPOLA-214ENST00000555508 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
PAPOLA-214ENST00000555508 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
PAPOLA-214ENST00000555508 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
PAPOLA-214ENST00000555508 FKBP8Q14318 412 aa15.24■□□□□ 0.03
PAPOLA-214ENST00000555508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
PAPOLA-214ENST00000555508 AMER1Q5JTC6 1135 aaPredicted RBP15.16■□□□□ 0.02
PAPOLA-214ENST00000555508 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
PAPOLA-214ENST00000555508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
PAPOLA-214ENST00000555508 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
PAPOLA-214ENST00000555508 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
PAPOLA-214ENST00000555508 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
PAPOLA-214ENST00000555508 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
PAPOLA-214ENST00000555508 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
PAPOLA-214ENST00000555508 APLP2Q06481 763 aa14.77□□□□□ -0.05
PAPOLA-214ENST00000555508 ZNF219Q9P2Y4 722 aaPredicted RBP14.76□□□□□ -0.05
PAPOLA-214ENST00000555508 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
PAPOLA-214ENST00000555508 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
PAPOLA-214ENST00000555508 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
PAPOLA-214ENST00000555508 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
PAPOLA-214ENST00000555508 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
PAPOLA-214ENST00000555508 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
PAPOLA-214ENST00000555508 FBLN2P98095 1184 aa14.43□□□□□ -0.1
PAPOLA-214ENST00000555508 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
PAPOLA-214ENST00000555508 POLA2Q14181 598 aa14.35□□□□□ -0.11
PAPOLA-214ENST00000555508 CAPN15O75808 1086 aa14.33□□□□□ -0.12
PAPOLA-214ENST00000555508 PROM2Q8N271 834 aa14.32□□□□□ -0.12
PAPOLA-214ENST00000555508 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
PAPOLA-214ENST00000555508 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
PAPOLA-214ENST00000555508 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
PAPOLA-214ENST00000555508 ABCB7O75027 752 aa14.13□□□□□ -0.15
PAPOLA-214ENST00000555508 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
PAPOLA-214ENST00000555508 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
PAPOLA-214ENST00000555508 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
PAPOLA-214ENST00000555508 PKD2Q13563 968 aa13.92□□□□□ -0.18
PAPOLA-214ENST00000555508 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
PAPOLA-214ENST00000555508 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
PAPOLA-214ENST00000555508 DSG3P32926 999 aa13.87□□□□□ -0.19
PAPOLA-214ENST00000555508 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
PAPOLA-214ENST00000555508 SPOCK2Q92563 424 aa13.84□□□□□ -0.19
PAPOLA-214ENST00000555508 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
PAPOLA-214ENST00000555508 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
PAPOLA-214ENST00000555508 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
PAPOLA-214ENST00000555508 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
PAPOLA-214ENST00000555508 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
PAPOLA-214ENST00000555508 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
PAPOLA-214ENST00000555508 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
PAPOLA-214ENST00000555508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
PAPOLA-214ENST00000555508 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
PAPOLA-214ENST00000555508 MIER1Q8N108 512 aa13.7□□□□□ -0.22
PAPOLA-214ENST00000555508 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
PAPOLA-214ENST00000555508 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
PAPOLA-214ENST00000555508 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
PAPOLA-214ENST00000555508 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
PAPOLA-214ENST00000555508 RGL2O15211 777 aa13.56□□□□□ -0.24
PAPOLA-214ENST00000555508 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
PAPOLA-214ENST00000555508 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
PAPOLA-214ENST00000555508 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-214ENST00000555508 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-214ENST00000555508 BCANQ96GW7 911 aa13.51□□□□□ -0.25
PAPOLA-214ENST00000555508 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
PAPOLA-214ENST00000555508 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
PAPOLA-214ENST00000555508 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
PAPOLA-214ENST00000555508 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
PAPOLA-214ENST00000555508 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
PAPOLA-214ENST00000555508 GSE1Q14687 1217 aa13.31□□□□□ -0.28
PAPOLA-214ENST00000555508 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
PAPOLA-214ENST00000555508 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
PAPOLA-214ENST00000555508 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
PAPOLA-214ENST00000555508 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
PAPOLA-214ENST00000555508 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
PAPOLA-214ENST00000555508 NUBP1P53384 320 aa13.24□□□□□ -0.29
PAPOLA-214ENST00000555508 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms